COBRApy is a package for constraint-based modeling of metabolic networks.
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Updated
Jun 9, 2025 - Python
COBRApy is a package for constraint-based modeling of metabolic networks.
COnstraint Based Reconstruction and EXascale Analysis (in Julia)
LibSBMLSim: A library for simulating SBML models
Spatial Model Simulator with SBML Model
LibSBMLSim: A library for simulating SBML models (Version 2)
Easily usable JavaFx-based inSilico module for dynamic Systems Biology Markup Language (SBML) model simulation visualization. Provides an intuitive Graphical User Interface for dynamic processing based on SBSCL.
Analysis of Dynamic Adaptations in Parameter Trajectories
Vue3 Project using Pyodide / basico and python-copasi emscripten
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