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Sep 19, 2021 - Common Workflow Language
common-workflow-language

CWL documents describe workflows made of command line data analysis tools in a portable, reproducible, and reusable fashion.
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Can someone explain to me how to use InitialWorkDir
requirements without any input parameters.
For instance, I need to put my shell scripts near with cwl script
and run them from that cwl script
. Is there some way don't use absolute path to scripts? I tried to use EnvVariable like that:
baseCommand: sh
arguments: [$SCRIPT_FOLDER/script.sh]
But it is not working.
Then I foun
Either via Python libraries, or handing off to 3rd party tools
- DOI to bibtex
- conda & Debian package name to bibtex
- bio.tools identifier to bibtex
- RRID to bibtext
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Describe the bug
geopython/OWSLib@8b6b101 integrated fix (geopython/OWSLib#793) of Timeout WPS not being forwarded to the request readers.
This should be integrated as soon as possible when a new version is released.
Changes since last pinned OWSLib
version are minor as they do not modify wps
module.
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Created by Peter Amstutz, John Chilton, Michael R. Crusoe, Nebojša Tijanić, and the CWL Community
Released January 2015
- Organization
- common-workflow-language
- Website
- www.commonwl.org
- Wikipedia
- Wikipedia
And link to https://github.com/common-workflow-language/cwl-utils#pull-the-all-referenced-software-container-images