hdf5
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Consolidating multiple issues here:
- blacklist BED file with one entry #196
- bg2 file with a header #128
- malformed pairs file #135
- spaces instead of tabs in chromsizes file #124
- other chromsizes weirdness #142
Any chance to implement comfit?
If not, how to get exponential fitting with implemented functions in GDL?
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Jun 9, 2021 - C++
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Jul 28, 2021 - Java
2) Feature Request
Currently the ordering of dimensions described in the schema is in many cases not listed in the documentation. E.g., for ElectricalSeries.data
we should add to the docval that the dimensions are num_time | num_channels
. This would help users avoid errors with ordering of dimensions.
This issue was motivated by #960
This issue is in part also related to #626
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Describe the bug
When setting a series' file name without the %T
and switching the IterationEncoding
to fileBased
the code runs into an infinite loop.
To Reproduce
C++
#include <openPMD/openPMD.hpp>
void error_openPMD()
{
::openPMD::Series series = ::openPMD::Series("error.h5", ::openPMD::Access::CREATE);
series.iterations[10];
series.setIterationEnc
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Hello,
Considering your amazing efficiency on pandas, numpy, and more, it would seem to make sense for your module to work with even bigger data, such as Audio (for example .mp3 and .wav). This is something that would help a lot considering the nature audio (ie. where one of the lowest and most common sampling rates is still 44,100 samples/sec). For a use case, I would consider vaex.open('Hu