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modeling

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dash

GemPy is an open-source, Python-based 3-D structural geological modeling software, which allows the implicit (i.e. automatic) creation of complex geological models from interface and orientation data. It also offers support for stochastic modeling to adress parameter and model uncertainties.
  • Updated Oct 8, 2021
  • Python
jeremymchacon
jeremymchacon commented Aug 25, 2020

Hello maintainers of the amazing package,

I recently updated cobrapy and am experienced unexpected behavior with cobra.test.create_test_model("salmonella")

Two things are unusual:

  1. Now, many warnings are given during loading of the model, whereas none were given in a previous version. Here are a few of the warnings:

`Model does not contain SBML fbc package information.
SBML package

epsstan
epsstan commented Mar 23, 2021

Feature Request

Provide default configuration file/settings.

Description of Problem:

Our images do not ship with any default configuration file/settings. While all of them require configuration like Gitlab OAuth application id etc that cannot be defaulted, we can provide configuration files that for example read values from environment variables etc.

This makes it easy for containe

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