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Data Science in Systems Biology

The research group Data Science in Systems Biology at the School of Life Sciences, Technical University of Munich

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  1. drevalpy drevalpy Public

    DrEval is a toolkit that ensures drug response prediction evaluations are statistically sound, biologically meaningful, and reproducible.

    Python 25 2

  2. data-leakage-ppi-prediction data-leakage-ppi-prediction Public

    Code associated with the paper 'Cracking the blackbox of deep sequence-based protein-protein interaction prediction'

    C++ 24 1

  3. OpenLabFramework OpenLabFramework Public archive

    A open source framework for research data management. DEMO at https://dockerhts.compbio.sdu.dk/OpenLabFramework/login/auth

    JavaScript 21 6

  4. NEASE NEASE Public

    A network-based approach for exon set enrichment

    Python 15 2

  5. TF-Prioritizer TF-Prioritizer Public

    Bioinformatics pipeline to identify differentially active transcription factors between conditions using expression and epigenetic data

    Java 14

  6. SPONGE SPONGE Public

    Sparse Partial correlation ON Gene Expression - an R package for fast and robust ceRNA network inference

    R 12 9

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