Transcriptomics

Latest research

1. CellNEST reveals cell–cell relay networks using attention mechanisms on spatial transcriptomics

   • Fatema Tuz Zohora
   • Deisha Paliwal
   • Gregory W. Schwartz

   in Nature Methods

   Article Open access 06 June 2025

   

2. SpotSweeper: spatially aware quality control for spatial transcriptomics

   • Michael Totty
   • Stephanie C. Hicks
   • Boyi Guo

   in Nature Methods

   Article 06 June 2025

   

3. Transcriptional characterization of sepsis in a LPS porcine model

   • Ryan Neill

   in Molecular Genetics and Genomics

   Article 05 June 2025

   

4. Differentially expressed transcripts associated with depressive symptoms during pregnancy and postpartum

   • Richelle D. Björvang
   • Maria Vrettou
   • Alkistis Skalkidou

   in Molecular Psychiatry

   Article Open access 05 June 2025

   

5. Machine learning and multi-omics analysis reveal key regulators of proneural–mesenchymal transition in glioblastoma

   • Can Xu
   • Jin Yang
   • Ruxiang Xu

   in Scientific Reports

   Article Open access 05 June 2025

   

6. High-definition spatial transcriptomic profiling of immune cell populations in colorectal cancer

   • Michelli Faria de Oliveira
   • Juan Pablo Romero
   • Sarah E. B. Taylor

   in Nature Genetics

   Article Open access 05 June 2025

   

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