2N2X | pdb_00002n2x

Solution structure of [GlyB24,B27-B29 triazole cross-linked]-insulin analogue at pH 1.9


Experimental Data Snapshot

  • Method:&nbspSOLUTION NMR
  • Conformers Calculated:&nbsp100&nbsp
  • Conformers Submitted:&nbsp30&nbsp
  • Selection Criteria:&nbsptarget function&nbsp

wwPDB Validation&nbsp &nbsp3D Report&nbspFull Report


This is version 1.1 of the entry. See complete&nbsphistory.&nbsp


Literature

Rational steering of insulin binding specificity by intra-chain chemical crosslinking.

Vikova, J.,&nbspCollinsova, M.,&nbspKletvikova, E.,&nbspBudesinsky, M.,&nbspKaplan, V.,&nbspZakova, L.,&nbspVeverka, V.,&nbspHexnerova, R.,&nbspAvino, R.J.,&nbspStrakova, J.,&nbspSelicharova, I.,&nbspVanek, V.,&nbspWright, D.W.,&nbspWatson, C.J.,&nbspTurkenburg, J.P.,&nbspBrzozowski, A.M.,&nbspJiracek, J.

(2016) Sci Rep&nbsp6: 19431-19431

  • DOI:&nbsphttps://doi.org/10.1038/srep19431
  • Primary Citation of Related Structures: &nbsp
    2N2V, 2N2W, 2N2X, 5BOQ, 5BPO, 5BQQ

  • PubMed Abstract:&nbsp

    Insulin is a key hormone of human metabolism with major therapeutic importance for both types of diabetes. New insulin analogues with more physiological profiles and better glycemic control are needed, especially analogues that preferentially bind to the metabolic B-isoform of insulin receptor (IR-B). Here, we aimed to stabilize and modulate the receptor-compatible conformation of insulin by covalent intra-chain crosslinking within its B22-B30 segment, using the Cu(I)-catalyzed Huisgen 1,3-dipolar cycloaddition reaction of azides and alkynes. This approach resulted in 14 new, systematically crosslinked insulin analogues whose structures and functions were extensively characterized and correlated. One of the analogues, containing a B26-B29 triazole bridge, was highly active in binding to both IR isoforms, with a significant preference for IR-B. Our results demonstrate the potential of chemistry-driven modulation of insulin function, also shedding new light on the functional importance of hormone's B-chain C-terminus for its IR-B specificity.


  • Organizational Affiliation:&nbsp

    Institute of Organic Chemistry and Biochemistry, the Czech Academy of Sciences, v.v.i., Flemingovo n. 2, 166 10 Praha 6, Czech Republic.


Macromolecules

Find similar proteins by:  Sequence   |   3D Structure  

Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Insulin A chain21Homo sapiensMutation(s): 0&nbsp
UniProt & NIH Common Fund Data Resources
Find proteins for&nbspP01308&nbsp(Homo sapiens)
Explore&nbspP01308&nbsp
Go to UniProtKB: &nbspP01308
PHAROS: &nbspP01308
GTEx: &nbspENSG00000254647&nbsp
Entity Groups &nbsp
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP01308
Sequence Annotations
Expand
  • Reference Sequence
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
Insulin B chain30Homo sapiensMutation(s): 3&nbsp
UniProt & NIH Common Fund Data Resources
Find proteins for&nbspP01308&nbsp(Homo sapiens)
Explore&nbspP01308&nbsp
Go to UniProtKB: &nbspP01308
PHAROS: &nbspP01308
GTEx: &nbspENSG00000254647&nbsp
Entity Groups &nbsp
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP01308
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Modified Residues  2 Unique
IDChains TypeFormula2D DiagramParent
HIX
Query on HIX
B
L-PEPTIDE LINKINGC5 H8 N4 O2ALA
NVA
Query on NVA
B
L-PEPTIDE LINKINGC5 H11 N O2VAL
Experimental Data & Validation

Experimental Data

  • Method:&nbspSOLUTION NMR
  • Conformers Calculated:&nbsp100&nbsp
  • Conformers Submitted:&nbsp30&nbsp
  • Selection Criteria:&nbsptarget function&nbsp

Structure Validation

View&nbspFull Validation Report



Entry History&nbsp

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2016-02-03
    Type: Initial release
  • Version 1.1: 2023-12-27
    Changes: Data collection, Database references, Derived calculations