6M6F | pdb_00006m6f

Solution structure of disulfide bond mutaion of the core domain of Fibroblast growth factor 21 (FGF21)

  • Classification:&nbspHORMONE
  • Organism(s):&nbspHomo sapiens
  • Expression System:&nbspEscherichia coli K-12
  • Mutation(s):&nbspYes&nbsp

  • Deposited:&nbsp2020-03-14&nbspReleased:&nbsp2021-01-20&nbsp
  • Deposition Author(s):&nbspZhu, L., Zhao, H., Wang, J.
  • Funding Organization(s):&nbspNational Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

  • Method:&nbspSOLUTION NMR
  • Conformers Calculated:&nbsp200&nbsp
  • Conformers Submitted:&nbsp10&nbsp
  • Selection Criteria:&nbspstructures with the lowest energy&nbsp

wwPDB Validation&nbsp &nbsp3D Report&nbspFull Report


This is version 1.3 of the entry. See complete&nbsphistory.&nbsp


Literature

Dynamic folding modulation generates FGF21 variant against diabetes.

Zhu, L.,&nbspZhao, H.,&nbspLiu, J.,&nbspCai, H.,&nbspWu, B.,&nbspLiu, Z.,&nbspZhou, S.,&nbspLiu, Q.,&nbspLi, X.,&nbspBao, B.,&nbspLiu, J.,&nbspDai, H.,&nbspWang, J.

(2021) EMBO Rep&nbsp22: e51352-e51352

  • DOI:&nbsphttps://doi.org/10.15252/embr.202051352
  • Primary Citation of Related Structures: &nbsp
    6M6E, 6M6F

  • PubMed Abstract:&nbsp

    Fibroblast growth factor 21 (FGF21) is a regulator of glucose and lipid metabolism. It has been widely considered as a promising candidate for the treatment of type 2 diabetes mellitus (T2DM) and other related metabolic disorders. However, lack of structural and dynamic information has limited FGF21-based drug development. Here, using nuclear magnetic resonance (NMR) spectroscopy, we determine the structure of FGF21 and find that its non-canonical flexible β-trefoil conformation affects the folding of β2-β3 hairpin and further overall protein stability. To modulate folding dynamics, we designed an FGF21-FGF19 chimera, FGF21 SS . As expected, FGF21 SS shows better thermostability without inducing hepatocyte proliferation. Functional characterization of FGF21 SS shows its better insulin sensitivity, reduced inflammation in 3T3-L1 adipocytes, and lower blood glucose and insulin levels in ob/ob mice compared with wild type. Our dynamics-based rational design provides a promising approach for FGF21-based therapeutic development against T2DM.


  • Organizational Affiliation:&nbsp

    High Magnetic Field Laboratory, CAS Key Laboratory of High Magnetic Field and Ion Beam Physical Biology, Hefei Institutes of Physical Science, Chinese Academy of Sciences, Hefei, China.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Fibroblast growth factor 21129Homo sapiensMutation(s): 9&nbsp
Gene Names:&nbspFGF21
UniProt & NIH Common Fund Data Resources
Find proteins for&nbspQ9NSA1&nbsp(Homo sapiens)
Explore&nbspQ9NSA1&nbsp
Go to UniProtKB: &nbspQ9NSA1
PHAROS: &nbspQ9NSA1
GTEx: &nbspENSG00000105550&nbsp
Entity Groups &nbsp
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ9NSA1
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method:&nbspSOLUTION NMR
  • Conformers Calculated:&nbsp200&nbsp
  • Conformers Submitted:&nbsp10&nbsp
  • Selection Criteria:&nbspstructures with the lowest energy&nbsp

Structure Validation

View&nbspFull Validation Report



Entry History&nbsp& Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)ChinaU1532269
National Natural Science Foundation of China (NSFC)China31100539

Revision History  (Full details and data files)

  • Version 1.0: 2021-01-20
    Type: Initial release
  • Version 1.1: 2021-03-03
    Changes: Database references
  • Version 1.2: 2023-06-14
    Changes: Database references, Other
  • Version 1.3: 2024-11-06
    Changes: Data collection, Database references, Structure summary